Picture this: you’ve written a Python script to process a massive dataset. You hit ‘Run,’ grab a coffee, and settle in for what you think will be a quick wait. But minutes turn into hours, and your code is still chugging along. Sound familiar? That was me just a few weeks ago. Frustrated and racing against a deadline, I discovered something that changed everything: Cython.
Skeptical? I was too. After all, Python is known for being slow, right? But what if I told you that with a few tweaks, you can make your Python code run as fast as C—without rewriting everything from scratch? In this post, I’ll show you how I transformed my sluggish Python script into a speed demon, and why you might want to ditch pure Python for CPU-heavy tasks.
Why is Python Slow?
Python is one of the most popular programming languages, but when it comes to execution speed, it has some well-known drawbacks:
- Interpreted Language: Python code runs line by line instead of being compiled into machine code ahead of time.
- Global Interpreter Lock (GIL): Python’s GIL prevents true multi-threading, limiting CPU-bound performance.
- Dynamic Typing: While dynamic typing makes Python flexible, it adds runtime overhead for type checking.
Despite these limitations, Python’s ease of use makes it the go-to language for many developers. But what if you could keep Python’s simplicity and get C-like performance? That’s exactly where Cython comes in.
What is Cython?
Cython is a superset of Python that allows you to write Python code that compiles into highly optimized C code. By adding C data types and removing the GIL (Global Interpreter Lock) where possible, you can achieve speeds close to pure C performance.
With Cython, you can:
- Speed up CPU-bound Python code.
- Use C data types for faster numerical computations.
- Remove the GIL to enable true multi-threading and maximize CPU performance.
- Interface with existing C/C++ libraries easily.
Benchmarking Python vs. Cython Performance
using Google Colab, you may need to install it each session:
!pip install cython
Cython code can be compiled using %%cython magic command in Jupyter/Colab:
%load_ext Cython
Let’s start with a simple example: summing numbers from 0 to n.
Python Version (Slowest)
import timedef python_sum(n):total = 0for i in range(n):total += ireturn totalstart = time.time()python_sum(10**7) # 10 million iterationsprint("Python Execution Time:", time.time() - start)import time def python_sum(n): total = 0 for i in range(n): total += i return total start = time.time() python_sum(10**7) # 10 million iterations print("Python Execution Time:", time.time() - start)import time def python_sum(n): total = 0 for i in range(n): total += i return total start = time.time() python_sum(10**7) # 10 million iterations print("Python Execution Time:", time.time() - start)
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Cython Optimized Version
Run this in a separate cell:
%%cythondef cython_sum(int n):cdef int total = 0cdef int ifor i in range(n):total += ireturn total%%cython def cython_sum(int n): cdef int total = 0 cdef int i for i in range(n): total += i return total%%cython def cython_sum(int n): cdef int total = 0 cdef int i for i in range(n): total += i return total
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start = time.time()cython_sum(n)print("Cython Execution Time:", time.time() - start)start = time.time() cython_sum(n) print("Cython Execution Time:", time.time() - start)start = time.time() cython_sum(n) print("Cython Execution Time:", time.time() - start)
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Removing GIL for Faster Execution
The GIL (Global Interpreter Lock) limits Python to single-threaded execution. Removing it in Cython allows truly parallel execution.
%%cythondef cython_sum_nogil(int n):cdef int total = 0cdef int iwith nogil:for i in range(n):total += ireturn total%%cython def cython_sum_nogil(int n): cdef int total = 0 cdef int i with nogil: for i in range(n): total += i return total%%cython def cython_sum_nogil(int n): cdef int total = 0 cdef int i with nogil: for i in range(n): total += i return total
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start = time.time()cython_sum_nogil(n)print("Cython (No GIL) Execution Time:", time.time() - start)start = time.time() cython_sum_nogil(n) print("Cython (No GIL) Execution Time:", time.time() - start)start = time.time() cython_sum_nogil(n) print("Cython (No GIL) Execution Time:", time.time() - start)
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Parallelizing with prange (Fastest!)
For multi-core execution, we use prange from cython.parallel.
%%cythonfrom cython.parallel import prangecimport cython@cython.boundscheck(False)@cython.wraparound(False)def cython_sum_parallel(int n):cdef int total = 0cdef int iwith nogil:for i in prange(n, schedule='dynamic', num_threads=4):total += ireturn total%%cython from cython.parallel import prange cimport cython @cython.boundscheck(False) @cython.wraparound(False) def cython_sum_parallel(int n): cdef int total = 0 cdef int i with nogil: for i in prange(n, schedule='dynamic', num_threads=4): total += i return total%%cython from cython.parallel import prange cimport cython @cython.boundscheck(False) @cython.wraparound(False) def cython_sum_parallel(int n): cdef int total = 0 cdef int i with nogil: for i in prange(n, schedule='dynamic', num_threads=4): total += i return total
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start = time.time()cython_sum_parallel(n)print("Cython (Parallel No GIL) Execution Time:", time.time() - start)start = time.time() cython_sum_parallel(n) print("Cython (Parallel No GIL) Execution Time:", time.time() - start)start = time.time() cython_sum_parallel(n) print("Cython (Parallel No GIL) Execution Time:", time.time() - start)
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Conclusion: When to Use Cython?
Use Cython when performance matters, especially for CPU-heavy loops.
Remove GIL for multi-threading without Python’s limitations.
Use prange when working with multi-core processors.
If you need faster numerical computations, also check out Numba (JIT compilation), but for low-level control, Cython is the best!
原文链接:Python is Slow? Not Anymore! How I Made My Code 100x Faster with Cython (And Why You Should Too)
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